Alignment of alleles: Chinese perch (Siniperca chuatsi) IGIJ (overview)

Only one sequence for each allele is shown. Other known sequences are shown in the individual Alignments of alleles.

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

The F, G and G of the FGXG motif are shown in brown, in the allele *01 amino acid sequence. 

                                 W   T   F   G   G   G   T   R   L   D   V   G  
  AF454468,IGIJ1S1*01           TGG ACT TTT GGT GGA GGA ACC AGA CTG GAT GTT GGA  #c

                                 F   T   F   G   G   G   T   R   L   D   V   G  
  AF454469,IGIJ1S2*01           TTC ACG TTC GGT GGA GGA ACC AGA CTG GAT GTT GGA  #c

                                 W   T   F   G   G   G   T   R   L   D   V   G  
  AF454470,IGIJ1S3*01           TGG ACT TTT GGT GGA GGA ACC AGA CTG GAT GTT GGA  #c

                                 Y   T   F   G   G   G   T   R   L   D   V   G  
  AY013293,IGIJ1S4*01           TAC ACG TTC GGT GGA GGA ACC AGA CTG GAT GTT GGA  #c 

                                 L   T   F   G   G   G   T   R   L   D   V   G  
  AY013294,IGIJ1S5*01           TTG ACT TTT GGT GGA GGA ACC AGA CTG GAT GTT GGA  #c

#c: rearranged cDNA

Created: 01/10/2003
Author: Nathalie Bosc